Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7789557 chr7:140149227 C/A LOC441455 chr9:99488103-99489749:+ 0.5 6.77 3.74E-11 Box Plot
THCA rs7790232 chr7:140174811 G/A LOC441455 chr9:99488103-99489749:+ 0.46 6.1 2.23E-9 Box Plot
THCA rs7790368 chr7:33055164 T/C FKBP9L chr7:55748767-55780945:- 0.34 7.17 2.84E-12 Box Plot
THCA rs779144 chr17:18288408 G/A LOC162632 chr17:16614993-16707819:+ 0.45 7.74 5.83E-14 Box Plot
THCA rs7791865 chr7:27959430 A/T PKIG chr20:43160426-43252888:+ 0.34 5.89 7.13E-9 Box Plot
THCA rs7792057 chr7:33052021 G/A FKBP9L chr7:55748767-55780945:- 0.4 9.02 4.66E-18 Box Plot
THCA rs7793131 chr7:33127539 C/A FKBP9L chr7:55748767-55780945:- 0.37 6.72 5.03E-11 Box Plot
THCA rs7793793 chr7:33070175 C/T FKBP9L chr7:55748767-55780945:- 0.34 7.17 2.84E-12 Box Plot
THCA rs77948921 chr16:30339753 G/A NPIPL3 chr16:21413451-21458484:- 0.2 5.9 6.96E-9 Box Plot
THCA rs7795860 chr7:33082489 C/T FKBP9L chr7:55748767-55780945:- 0.34 7.14 3.54E-12 Box Plot
THCA rs7796184 chr7:33082731 C/T FKBP9L chr7:55748767-55780945:- 0.4 7.49 3.43E-13 Box Plot
THCA rs7798138 chr7:33070605 G/A FKBP9L chr7:55748767-55780945:- 0.43 9.71 1.79E-20 Box Plot
THCA rs7798538 chr7:33071045 C/A FKBP9L chr7:55748767-55780945:- 0.42 9.51 9.2E-20 Box Plot
THCA rs7800610 chr7:33096267 G/A FKBP9L chr7:55748767-55780945:- 0.4 7.51 3.01E-13 Box Plot
THCA rs7800959 chr7:140121480 T/C LOC441455 chr9:99488103-99489749:+ 0.51 6.37 4.48E-10 Box Plot